圣淘沙名胜世界(新加坡)

    Q5® Site-Directed Mutagenesis (E0554)

    New England Biolabs

    Published: 2022-02-14 DOI: 10.17504/protocols.io.bddfi23n
    AI 解读
    浏览 1566

    Abstract

    This is the protocol for the Q5® Site-Directed Mutagenesis Kit (E0554).

    Before start

    Steps

    Exponential Amplification (PCR)

    1.

    Assemble the following reagents in a thin-walled PCR tube.

    ABC
    25 μl RXNFINAL CONC.
    Q5 Hot Start High-Fidelity 2X Master Mix12.5 μl1X
    10 μM Forward Primer1.25 μl0.5 μM
    10 μM Reverse Primer1.25 μl0.5 μM
    Template DNA (1–25 ng/μl)1 μl1-25 ng
    Nuclease-free water9.0 μl
    2.

    Mix reagents completely.

    3.

    Transfer to a thermocycler and perform the following cycling conditions:

    Thermocycling Conditions for a Routine PCR:

    ABC
    STEPTEMPTIME
    Initial Denaturation98°C30 seconds
    25 Cycles98°C10 seconds
    50–72°C*10–30 seconds
    72°C20–30 seconds/kb
    Final Extension72°C2 minutes
    Hold4–10°C
    • For a Q5-optimized annealing temperature of mutagenic primers, please use NEBaseChanger™, the online NEB primer design software. For pre-designed, back-to-back primer sets, a Ta = Tm + 3 rule can be applied, but optimization may be necessary.

    Kinase, Ligase & DpnI (KLD) Treatment

    4.

    Assemble the following reagents:

    ABC
    VOLUMEFINAL CONC.
    PCR Product1 μl
    2X KLD Reaction Buffer5 μl1X
    10X KLD Enzyme Mix1 μl1X
    Nuclease-free Water3 μl
    5.

    Mix well by pipetting up and down.

    6.

    Incubate at Room temperature for 0h 5m 0s.

    Transformation

    7.

    Thaw a tube of NEB 5-alpha Competent E. coli cells On ice.

    8.

    Add 5µL from the "KLD Section" above to the tube of thawed cells.

    9.

    Carefully flick the tube 4-5 times to mix. Do not vortex.

    10.

    Place the mixture On ice for 0h 30m 0s.

    11.

    Heat shock at 42°C for 0h 0m 30s.

    12.

    Place 42On ice for 0h 5m 0s.

    13.

    Pipette 950µL into the mixture.

    14.

    Incubate at 37°C for 1h 0m 0s with shaking (250rpm,0h 0m 0s).

    15.

    Mix the cells thoroughly by flicking the tube and inverting.

    16.

    Spread 50µL-100µL onto a selection plate.

    17.

    Incubate 1h 0m 0s at 37°C.

    Note
    It may be necessary (particularly for simple substitution and deletion experiments) to make a 10- to 40-fold dilution of the transformation mix in SOC prior to plating, to avoid a lawn of colonies.

    推荐阅读

    Nature Protocols
    Protocols IO
    Current Protocols
    扫码咨询